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DataProcessing3T Prisma

Data server†

File server: hebb
nfs://hebb/export/usr1

3T†

samba/physiofixdata : analog recording data(fMRI studies)
samba/video : movie data(fMRI studies)
samba/data : DICOM data transferred from the scanner
samba/study : links to the individual data folder

example:

scan date: 2016Jun23
subjectID:110404M2001
LAB/experimenter: CBM
project name: FMRI

samba/data/160623/110404M2001.CBM_FMRI/

7T†

samba/physiofixdata2 : analog recording data(fMRI studies)
samba/video2 : movie data(fMRI studies)
sdc/data : dicom data transferred from the scanner

Data folder structure†

3T (XA60 from 2025Apr)†

└── 250404M2002.CBSlab_EXP
├── 000001 <DICOM data folder>
├── 000002
├── 000006 <The number can be skipped>
├── 000021
├── 000023
├── 000024
├── 000025
├── af.log
├── dat  <raw data>
├── eja_svs_steam_RFpower_XA60_16_MR <Manually transferred data has this kind of foldername>
├── eja_svs_steam_water_XA60_14_MR
├── jn_MEGA_GABA_normal_WS_XA60_18_MR
├── jn_MEGA_GABA_normal_XA60_20_MR
├── jn_MEGA_GABA_normal_XA60_27_MR
├── physio <analog data>
└── video <video data>

3T case†

   └── 250307M2002.CBSlab_EXP
    ├── 0001 <Symbolic link to the DICOM data in IMA>
    ├── 0002 <.>
    ├── 0003 <.>
    ├── 0004 <.>
    ├── 0005 <.>
    ├── 0006 <.>
    ├── 0007 <.>
    ├── 0008 <.>
    ├── 0009 <Symbolic link to the DICOM data in IMA>
    ├── IMA <All DICOM data>
    ├── af3_log.txt <data save log>
    ├── dat <raw data>
    ├── physio  <analog data>
    └── video <video data>

To save data into the current folder(.)†

rsync command

IMA and dat folders are excluded
> rsync -ahvL /usr1/samba/data/250307/250307M2002.CBSlab_EXP . --exclude 'dat' --exclude 'IMA' <RET>
To copy with the raw data
> rsync -ahvL /usr1/samba/data/250307/250307M2002.CBSlab_EXP . --exclude 'IMA' <RET>

cp command

>cp -pr /usr1/samba/data/250307/250307M2002.CBSlab_EXP ./ <RET>